Intro | JAGS model | NIMBLE model | Stan model | MCMCsummary | MCMCpstr | MCMCtrace | MCMCchains | MCMCplot | MCMCdiag | References
Package: MCMCvis 0.16.5
MCMCvis: Tools to Visualize, Manipulate, and Summarize MCMC Output
Performs key functions for MCMC analysis using minimal code - visualizes, manipulates, and summarizes MCMC output. Functions support simple and straightforward subsetting of model parameters within the calls, and produce presentable and 'publication-ready' output. MCMC output may be derived from Bayesian model output fit with Stan, NIMBLE, JAGS, and other software.
Authors:
MCMCvis_0.16.5.tar.gz
MCMCvis_0.16.5.zip(r-4.7)MCMCvis_0.16.5.zip(r-4.6)MCMCvis_0.16.5.zip(r-4.5)
MCMCvis_0.16.5.tgz(r-4.6-any)MCMCvis_0.16.5.tgz(r-4.5-any)
MCMCvis_0.16.5.tar.gz(r-4.7-any)MCMCvis_0.16.5.tar.gz(r-4.6-any)
MCMCvis_0.16.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
MCMCvis/json (API)
| # Install 'MCMCvis' in R: |
| install.packages('MCMCvis', repos = c('https://caseyyoungflesh.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/caseyyoungflesh/mcmcvis/issues
Datasets:
- MCMC_data - Simulated MCMC output data
- MCMC_data2 - Simulated MCMC output data - #2
Last updated from:3c7b05282d. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 190 | ||
| source / vignettes | OK | 202 | ||
| linux-release-x86_64 | OK | 176 | ||
| macos-release-arm64 | OK | 142 | ||
| macos-oldrel-arm64 | OK | 273 | ||
| windows-devel | OK | 161 | ||
| windows-release | OK | 140 | ||
| windows-oldrel | OK | 121 | ||
| wasm-release | OK | 197 |
Exports:MCMCchainsMCMCdiagMCMCplotMCMCpstrMCMCsummaryMCMCtrace
Dependencies:abindbackportsBHbriocallrcheckmateclicodacolorspacecpp11crayondescdiffobjdistributionalevaluatefarverfsgenericsggplot2gluegridExtragtableinlineisobandjsonlitelabelinglatticelifecycleloomagrittrmatrixStatsnumDerivoteloverlappingpillarpkgbuildpkgconfigpkgloadposteriorpraiseprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrprojrootrstanS7scalesStanHeaderstensorAtestthattibbleutf8vctrsviridisLitewaldowithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The 'MCMCvis' package | MCMCvis-package MCMCvis |
| Simulated MCMC output data | MCMC_data |
| Simulated MCMC output data - #2 | MCMC_data2 |
| Extract posterior chains from MCMC output | MCMCchains |
| Diagnostics summaries for models | MCMCdiag |
| Caterpillar plots of posterior distributions from MCMC output | MCMCplot |
| Summarize and extract posterior chains from MCMC output while preserving parameter structure | MCMCpstr |
| Summarize MCMC output | MCMCsummary |
| Trace and density plots from MCMC output | MCMCtrace |
