Package: MCMCvis 0.16.4

MCMCvis: Tools to Visualize, Manipulate, and Summarize MCMC Output

Performs key functions for MCMC analysis using minimal code - visualizes, manipulates, and summarizes MCMC output. Functions support simple and straightforward subsetting of model parameters within the calls, and produce presentable and 'publication-ready' output. MCMC output may be derived from Bayesian model output fit with 'Stan', 'NIMBLE', 'JAGS', and other software.

Authors:Casey Youngflesh [aut, cre], Christian Che-Castaldo [aut], Tyler Hardy [ctb]

MCMCvis_0.16.4.tar.gz
MCMCvis_0.16.4.zip(r-4.5)MCMCvis_0.16.4.zip(r-4.4)MCMCvis_0.16.4.zip(r-4.3)
MCMCvis_0.16.4.tgz(r-4.4-any)MCMCvis_0.16.4.tgz(r-4.3-any)
MCMCvis_0.16.4.tar.gz(r-4.5-noble)MCMCvis_0.16.4.tar.gz(r-4.4-noble)
MCMCvis_0.16.4.tgz(r-4.4-emscripten)MCMCvis_0.16.4.tgz(r-4.3-emscripten)
MCMCvis.pdf |MCMCvis.html✨
MCMCvis/json (API)
NEWS

# Install 'MCMCvis' in R:

install.packages('MCMCvis', repos = c('https://caseyyoungflesh.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/caseyyoungflesh/mcmcvis/issues

Datasets:

MCMC_data - Simulated MCMC output data
MCMC_data2 - Simulated MCMC output data - #2

On CRAN:

6 exports 37 stars 3.30 score 67 dependencies 2 dependents 3 mentions 988 scripts 1.6k downloads

Last updated 3 months agofrom:97a5e41edb. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 18 2024
R-4.5-win	OK	Sep 18 2024
R-4.5-linux	OK	Sep 18 2024
R-4.4-win	OK	Sep 18 2024
R-4.4-mac	OK	Sep 18 2024
R-4.3-win	OK	Sep 18 2024
R-4.3-mac	OK	Sep 18 2024

Exports:MCMCchains MCMCdiag MCMCplot MCMCpstr MCMCsummary MCMCtrace

Dependencies:abind backports BH brio callr checkmate cli coda colorspace crayon desc diffobj digest distributional evaluate fansi farver fs generics ggplot2 glue gridExtra gtable inline isoband jsonlite labeling lattice lifecycle loo magrittr MASS Matrix matrixStats mgcv munsell nlme numDeriv overlapping pillar pkgbuild pkgconfig pkgload posterior praise processx ps QuickJSR R6 RColorBrewer Rcpp RcppEigen RcppParallel rematch2 rlang rprojroot rstan scales StanHeaders tensorA testthat tibble utf8 vctrs viridisLite waldo withr

'MCMCvis' package

Casey Youngflesh, Christian Che-Castaldo

Rendered fromMCMCvis.Rmdusingknitr::rmarkdownon Sep 18 2024.

Last update: 2023-05-12
Started: 2016-10-05

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
The 'MCMCvis' package	MCMCvis-package MCMCvis
Simulated MCMC output data	MCMC_data
Simulated MCMC output data - #2	MCMC_data2
Extract posterior chains from MCMC output	MCMCchains
Diagnostics summaries for models	MCMCdiag
Caterpillar plots of posterior distributions from MCMC output	MCMCplot
Summarize and extract posterior chains from MCMC output while preserving parameter structure	MCMCpstr
Summarize MCMC output	MCMCsummary
Trace and density plots from MCMC output	MCMCtrace